bio_bits
stable
Installation
Scripts
rename_fasta
beast_checkpoint
beast_wrapper
group_references
degen
parallel_blast
degen_regions
plot_muts
fasta
AMOS
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rename_fasta
Rename Mapping File Syntax
beast_checkpoint
Example
Tracer
LogCombiner
beast_wrapper
Example
group_references
degen
How-to
Example:
Output:
Gene/Tab File
Genbank File
parallel_blast
Usage
Running inside of a PBS or SGE Job
degen_regions
Usage
Using Genbank Files
Fetching Genbank Files Automatically
Using tab/csv file of gene annotation info
Manually specify CDS
Without Gene Information
Output
plot_muts
Usage
Example comparing multiple sequences against a query sequence
Example using cluster method to use two references as x and y axis
Generating html graphics that are interactive
fasta
Usage
Examples
Read the Docs
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